BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025F02SP1|AL428412
(898 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1721 1764 0.0
>3x_Contig1721
Length = 17834
Score = 1764 bits (890), Expect = 0.0
Identities = 897/898 (99%), Gaps = 1/898 (0%)
Strand = Plus / Minus
Query: 1 atcccaacgtgccattggagacggaatcagtgaagcgtngtggtgataccaaagggacaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 6768 atcccaacgtgccattggagacggaatcagtgaagcgt-gtggtgataccaaagggacaa 6710
Query: 61 acttgtccgatatgtttatcggaagaccttatatctccgagaatggttgtttgtggtcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6709 acttgtccgatatgtttatcggaagaccttatatctccgagaatggttgtttgtggtcat 6650
Query: 121 gtcttctgtcaaacgtgtttgctccaactgtttaccaatgacccaatggtaggaaaaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6649 gtcttctgtcaaacgtgtttgctccaactgtttaccaatgacccaatggtaggaaaaaac 6590
Query: 181 gatgaaagtacgtatgcaaggatgaagcgcaaggatttaagagaatgcccgctttgtagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6589 gatgaaagtacgtatgcaaggatgaagcgcaaggatttaagagaatgcccgctttgtagt 6530
Query: 241 agcattatcaaaaagacaagcgtgaaacctgttcttttcactgacgcagactccaaggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6529 agcattatcaaaaagacaagcgtgaaacctgttcttttcactgacgcagactccaaggat 6470
Query: 301 aataccccaactattggttccatggtcgaattgcaactaatgtgtagacctcatggctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6469 aataccccaactattggttccatggtcgaattgcaactaatgtgtagacctcatggctcc 6410
Query: 361 ctactaccgttacctgttaacctcaacattgatccattctccattggaaatttcccatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6409 ctactaccgttacctgttaacctcaacattgatccattctccattggaaatttcccatca 6350
Query: 421 gtgcatatgaaagagttagccgtgtattcccgaatcatgaaatgtagcacgcaatatgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6349 gtgcatatgaaagagttagccgtgtattcccgaatcatgaaatgtagcacgcaatatgca 6290
Query: 481 atccatttattggagcgggataatttacagatatatgaacagttagaaatcgataaggcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6289 atccatttattggagcgggataatttacagatatatgaacagttagaaatcgataaggcg 6230
Query: 541 ttgtatcacgataatgggaagctggcacaattagcgttagatgaaaatgtatcattaatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6229 ttgtatcacgataatgggaagctggcacaattagcgttagatgaaaatgtatcattaatc 6170
Query: 601 aacggattaaaatccaagaacaacaataaagagcccgatatttctgccctttctattgca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6169 aacggattaaaatccaagaacaacaataaagagcccgatatttctgccctttctattgca 6110
Query: 661 tcaggtggattagaaaaatacaatgatgataatgcattcttctattacgaggctgggttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6109 tcaggtggattagaaaaatacaatgatgataatgcattcttctattacgaggctgggttc 6050
Query: 721 aactccaccacgaaattttatctttcaccattagacgttaaggtgttgaaaaacgtattt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6049 aactccaccacgaaattttatctttcaccattagacgttaaggtgttgaaaaacgtattt 5990
Query: 781 gcacactaccacgaattccctagcactatcaagatcaaagttgaagacatccattacgga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5989 gcacactaccacgaattccctagcactatcaagatcaaagttgaagacatccattacgga 5930
Query: 841 tcaatggttacggaaacaactatatccaaattcaagtatttctctcatttaccgattg 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5929 tcaatggttacggaaacaactatatccaaattcaagtatttctctcatttaccgattg 5872
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6203
Number of Sequences: 1807
Number of extensions: 6203
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 898
length of database: 10,358,551
effective HSP length: 16
effective length of query: 882
effective length of database: 10,329,639
effective search space: 9110741598
effective search space used: 9110741598
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)